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<title>bh20-seq-resource/bh20simplewebuploader, branch uuid-for-resource</title>
<subtitle>Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis</subtitle>
<id>http://git.systemreboot.net/bh20-seq-resource/atom?h=uuid-for-resource</id>
<link rel='self' href='http://git.systemreboot.net/bh20-seq-resource/atom?h=uuid-for-resource'/>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/'/>
<updated>2020-11-10T16:52:37+00:00</updated>
<entry>
<title>Use arvados uuids for RDF subjects.</title>
<updated>2020-11-10T16:52:37+00:00</updated>
<author>
<name>Peter Amstutz</name>
</author>
<published>2020-11-10T16:52:37+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=c01188ec20936462357b317f81567aadc64c8f33'/>
<id>urn:sha1:c01188ec20936462357b317f81567aadc64c8f33</id>
<content type='text'>
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz &lt;peter.amstutz@curii.com&gt;
</content>
</entry>
<entry>
<title>Extract PDH from result and construct URIs from that</title>
<updated>2020-11-09T22:30:16+00:00</updated>
<author>
<name>Peter Amstutz</name>
</author>
<published>2020-11-09T22:30:16+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=98a80bd64d8a495b8fddffdef6e07e5a3fbea1e3'/>
<id>urn:sha1:98a80bd64d8a495b8fddffdef6e07e5a3fbea1e3</id>
<content type='text'>
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz &lt;peter.amstutz@curii.com&gt;
</content>
</entry>
<entry>
<title>Make resource link work for both portable data hashes and sample id</title>
<updated>2020-11-09T22:20:27+00:00</updated>
<author>
<name>Peter Amstutz</name>
</author>
<published>2020-11-09T22:20:27+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=1082b907d816f5da52aba6233073737632d0242f'/>
<id>urn:sha1:1082b907d816f5da52aba6233073737632d0242f</id>
<content type='text'>
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz &lt;peter.amstutz@curii.com&gt;
</content>
</entry>
<entry>
<title>Make it so "pangenome analysis" only runs collect-seqs.</title>
<updated>2020-11-09T21:55:33+00:00</updated>
<author>
<name>Peter Amstutz</name>
</author>
<published>2020-11-09T21:55:33+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=b5143c79de268b844f3a6a63d92c6389b047f35e'/>
<id>urn:sha1:b5143c79de268b844f3a6a63d92c6389b047f35e</id>
<content type='text'>
Will ensure that metadata is kept up to date.

GFA isn't being generated.  Will introduce new workflow that uses
from_sparql to analyze a subset.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz &lt;peter.amstutz@curii.com&gt;
</content>
</entry>
<entry>
<title>Using 'DOCS' instead of 'BLOG'</title>
<updated>2020-11-05T11:31:50+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-11-05T11:31:50+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=1f470de17eba27d4406bb2840d5301cab3ccffda'/>
<id>urn:sha1:1f470de17eba27d4406bb2840d5301cab3ccffda</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Country information</title>
<updated>2020-10-28T16:35:02+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-10-28T16:35:02+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=2dddbdb2991df958699d5033b3f09f4f7367800b'/>
<id>urn:sha1:2dddbdb2991df958699d5033b3f09f4f7367800b</id>
<content type='text'>
</content>
</entry>
<entry>
<title>List by country and added to map</title>
<updated>2020-10-28T16:19:38+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-10-28T16:19:38+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=e9ea11c5332668af16c0497bf2b578433b05b32f'/>
<id>urn:sha1:e9ea11c5332668af16c0497bf2b578433b05b32f</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Fix DEMO links</title>
<updated>2020-10-28T15:21:05+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-10-28T15:21:05+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=89ccd3ce507ea2abad408a9df559aa3bbcc0e377'/>
<id>urn:sha1:89ccd3ce507ea2abad408a9df559aa3bbcc0e377</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Adding more metadata to resource uri</title>
<updated>2020-10-28T11:12:51+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-10-28T11:12:51+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=2e7ff0e040a011e4bc3aae2c2816c7f3f4ed875d'/>
<id>urn:sha1:2e7ff0e040a011e4bc3aae2c2816c7f3f4ed875d</id>
<content type='text'>
</content>
</entry>
<entry>
<title>Create permalink and some output</title>
<updated>2020-10-28T10:01:31+00:00</updated>
<author>
<name>Pjotr Prins</name>
</author>
<published>2020-10-28T10:01:31+00:00</published>
<link rel='alternate' type='text/html' href='http://git.systemreboot.net/bh20-seq-resource/commit/?id=e8e150c85414f67e9f15dfdcd04bcbe2369ac44f'/>
<id>urn:sha1:e8e150c85414f67e9f15dfdcd04bcbe2369ac44f</id>
<content type='text'>
</content>
</entry>
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