bh20-seq-resource/bh20simplewebuploader/templates/resource.html, branch masterTool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysishttp://git.systemreboot.net/bh20-seq-resource/atom?h=master2020-11-09T21:55:33+00:00Make it so "pangenome analysis" only runs collect-seqs.2020-11-09T21:55:33+00:00Peter Amstutz2020-11-09T21:55:33+00:00urn:sha1:b5143c79de268b844f3a6a63d92c6389b047f35e
Will ensure that metadata is kept up to date.
GFA isn't being generated. Will introduce new workflow that uses
from_sparql to analyze a subset.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Update links to reflect latest workflow2020-08-20T14:43:43+00:00Peter Amstutz2020-08-20T14:43:43+00:00urn:sha1:53bb39c7de934139ad9929ffb1b1772411233d80
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Comment out some broken links for now2020-07-17T21:59:16+00:00Peter Amstutz2020-07-17T21:59:16+00:00urn:sha1:6e6afb4b6be3f2f2c1b8b56d85d8c2089f709d26
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Get count from arvados2020-07-08T19:18:00+00:00Peter Amstutz2020-07-08T18:02:11+00:00urn:sha1:cbb191cb23f4e40b1a1d3024401960939fda9bc3
Separate pending/rejected tables
"Lastest results" is latest successful run.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
Split upload tab. Add upload status tab.2020-07-08T19:18:00+00:00Peter Amstutz2020-07-08T04:16:23+00:00urn:sha1:99af299197dfc527155cd3257388b784810518c4
Add more direct links on download page.
Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>