bh20-seq-resource, branch yamlfa2ttl Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis http://git.systemreboot.net/bh20-seq-resource/atom?h=yamlfa2ttl 2021-01-08T22:44:47+00:00 sample_id in the FASTA has to match the sample_id in the YAML 2021-01-08T22:44:47+00:00 AndreaGuarracino 2021-01-08T22:44:47+00:00 urn:sha1:53a47a18a45270c3f037fabe9cc973c66bfe50bf added check_metadata workflow and script 2021-01-07T23:25:55+00:00 AndreaGuarracino 2021-01-07T23:25:55+00:00 urn:sha1:2ddf72a4028475eb65dfeab153f3565e698d5338 remove old fields from esr_example.yaml 2021-01-07T23:06:38+00:00 AndreaGuarracino 2021-01-07T23:06:38+00:00 urn:sha1:8f385cdd408f8e72e13ec7f87b5413b11d3c2d53 made minimal_metadata_example.yaml and maximum_metadata_example.yaml valid 2021-01-07T22:55:14+00:00 AndreaGuarracino 2021-01-07T22:55:14+00:00 urn:sha1:a7611739e08f80d55565e4f25e5cfa90dc1f8e71 Merge branch 'master' into yamlfa2ttl 2021-01-07T22:50:01+00:00 AndreaGuarracino 2021-01-07T22:50:01+00:00 urn:sha1:4d841d279b2bf73da2ba815d53863c7f2861c956 fixed comments in the example yaml files 2021-01-07T22:46:18+00:00 AndreaGuarracino 2021-01-07T22:46:18+00:00 urn:sha1:c080c3cffedcc0cc99496b5e70fcfdf998978f16 added check_sequence workflow and script 2021-01-07T22:02:54+00:00 AndreaGuarracino 2021-01-07T22:02:54+00:00 urn:sha1:141e619929cee17018417d71111063015e73c366 Merge pull request #121 from BonfaceKilz/chore/add-extra-tab-for-all-feeds 2021-01-07T10:38:31+00:00 Pjotr Prins 2021-01-07T10:38:31+00:00 urn:sha1:7e2c0d4514ccfe2641a15881d53d2f31ae8573b9 Chore/add extra tab for all feeds Allow for xml and xml.gz files 2021-01-07T09:17:59+00:00 Pjotr Prins 2021-01-07T09:17:47+00:00 urn:sha1:329a1a7e122eda41016185d1b1e8d50d97f8857b cleaned utils.py 2021-01-06T13:13:13+00:00 AndreaGuarracino 2021-01-06T13:13:13+00:00 urn:sha1:27a2b926036211469eccbf8c3d9580182482bdc2