bh20-seq-resource, branch pangenome_workflow_abpoa Tool to upload SARS-CoV-2 sequences to BH20 Arvados instance and orchestrate analysis http://git.systemreboot.net/bh20-seq-resource/atom?h=pangenome_workflow_abpoa 2020-11-21T22:11:40+00:00 abPOA works better starting from shorter sequences 2020-11-21T22:11:40+00:00 AndreaGuarracino 2020-11-21T22:11:40+00:00 urn:sha1:bfd830f9d777c456409958030142155043ec1c68 added abPOA workflow; typos 2020-11-21T22:06:05+00:00 AndreaGuarracino 2020-11-21T22:06:05+00:00 urn:sha1:1e9a735e84a8e89099b1de2ec66c56669caf6cc8 added reversed_sorting parameter; typos 2020-11-21T21:00:34+00:00 AndreaGuarracino 2020-11-21T21:00:34+00:00 urn:sha1:862ae0235e3d1b105fa342cedf4aa59ae73d90c4 generalized spoa workflow 2020-11-21T20:21:36+00:00 AndreaGuarracino 2020-11-21T20:21:36+00:00 urn:sha1:3c35250eb6394ec8d0e28e4391ec23f2223345c8 Adding another example to the SPARQL playground 2020-11-19T22:55:59+00:00 lltommy 2020-11-19T22:55:59+00:00 urn:sha1:6814f9d74ca1d7fe4a7a08e5df0878557bd8e8f1 Give from_sparql more keep cache. 2020-11-19T02:25:14+00:00 Peter Amstutz 2020-11-19T02:24:52+00:00 urn:sha1:fd4b04479fb85f01d2cb2e582e9e470296b8b3cf Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> Fix typo. Give from_sparql more RAM. 2020-11-18T23:07:04+00:00 Peter Amstutz 2020-11-18T23:07:04+00:00 urn:sha1:0b2ac8667451f9dee7121b2d3d37f8f580e75cfb Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> Add query-to-gfa workflow 2020-11-18T22:05:12+00:00 Peter Amstutz 2020-11-18T22:03:01+00:00 urn:sha1:81daa0acc4c4a0827e1c1198f054f4d4dacd1daf Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com> Demo: add comment 2020-11-16T11:15:33+00:00 Pjotr Prins 2020-11-16T11:15:33+00:00 urn:sha1:ee8ea88dd6b372143c6b08f56856666ce2d0b622 Make demo results clickable 2020-11-16T11:10:52+00:00 Pjotr Prins 2020-11-16T11:10:46+00:00 urn:sha1:15264306d255042b0880409f40d5c69a007d8193